Debian Developers - Bug#408347: ITP: proda -- multiple alignment of protein sequences with repeated and sh

Author

Bug#408347: ITP: proda -- multiple alignment of protein sequences with repeated and sh

Charles Plessy

2007-01-25, 1:35 am

Package: wnpp
Severity: wishlist
Owner: Charles Plessy <charles-debian-nospam@plessy.org>

Package name : proda
Version : 1.0
Upstream Author : Tu Minh Phuong, Chuong Do, Robert Edgar, and Serafim Batzoglou
URL : http://proda.stanford.edu/
License : Public domain
Description : multiple alignment of protein sequences with repeated and shuffled elements

ProDA is a system for automated detection and alignment of homologous
regions in collections of proteins with arbitrary domain architectures.
Given an input set of unaligned sequences, ProDA identifies all
homologous regions appearing in one or more sequences, and returns a
collection of local multiple alignments for these regions.